PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007195.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 243aa MW: 27084.6 Da PI: 8.3814

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007195.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.7e-17	17	62	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+WT+eEd +l+++v+ G ++W+ I + ++ gR++k+c++rw + Cse_sc007195.1_g050.1 17 KGSWTPEEDAKLIQLVETQGARNWSVIGSSIP-GRSGKSCRLRWCNQ 62 799***************************.*********985 PP
2	Myb_DNA-binding	34.7	4.1e-11	87	120	12	47
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++a+ +G++ W+ I++ ++ gRt + +k++w++ Cse_sc007195.1_g050.1 87 ILRAHLIHGNK-WSVISKLLP-GRTNNAIKNHWNST 120 6899*****.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MTSSSSSNDT VNLLQKKGSW TPEEDAKLIQ LVETQGARNW SVIGSSIPGR SGKSCRLRWC 60 NQLSPNVQHR PFTPHEDDCN LVYNDVILRA HLIHGNKWSV ISKLLPGRTN NAIKNHWNST 120 LRQRGLTLTR SFGSESTQCD DNDVGLGLKN KKRRCVSVSV IVSDISSYDG MTVLTLLPLG 180 NGEKKKDGDE VEKGTVEIED TCLVDVMRKM IAKDVRSYID ELRAKDGSSF EPVLHHVPNR 240 VSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	148	154	LKNKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	7e-44	MYB family protein