PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007197.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 212aa    MW: 24174.9 Da    PI: 4.9393
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007197.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.2e-2062111356
                    AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                            y+G+r+++ +g+W+AeIrdp++     r++lg+f+taeeAa+a+++ ++k++g+
  Cse_sc007197.1_g020.1  62 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFDTAEEAARAYDKEARKIRGA 111
                            9*******.**********954...4*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MCGGAILADL IPRSRRLNPT DVWSNAFNND NPFESEFNHF VNKTSVVHET SNKKKRQRKN  60
LYRGIRQRPW GKWAAEIRDP RKGVRVWLGT FDTAEEAARA YDKEARKIRG AKAKVNFPNE  120
GDNFDHFDIK PVVVESCFEN VSFDEKKSEV VVVQEENEVQ KLSEELMAYE SYMKFYEIPY  180
LEGESTPVNA DGGGGGGGSI ELWSFDDLDD VV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15358KKKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.18e-46ERF family protein