PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007243.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 161aa    MW: 17910.3 Da    PI: 9.8895
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007243.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.56.3e-134385347
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           ++++eE + l  a++ +G+  W++I+r ++ gRt++ +k+ w+ +
  Cse_sc007243.1_g060.1 43 AFSKEENDVLMAAHAVYGNQ-WSKISRFLP-GRTDNRIKNQWHVL 85
                           69****************99.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MNHNCTGGPY GRMGSSHYIS SNSGKSCRLR WVNQLDPRIK ICAFSKEEND VLMAAHAVYG  60
NQWSKISRFL PGRTDNRIKN QWHVLTARRH KNVVTRLCDH ITYLIHMPSS FPTLAGDALV  120
PDNFMDAAIA GSMRNNSNLP EALNTSGAQT QANPSNIFTP P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.11e-29MYB family protein