PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007247.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 230aa    MW: 26168.9 Da    PI: 9.8679
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007247.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B361.11.8e-19131220198
                            EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                            f+k +++s+v+   +l lp  f++++  +k ++  +tl de+g +W+ k+    ++ +  l++GWk+F++a++L +gD +vF+l++ +
  Cse_sc007247.1_g020.1 131 FVKPMLQSHVSGGFWLGLPVYFCKQNL-PK-RDELMTLVDEDGDEWQAKY--LPRKTG--LSGGWKGFAEAHKLADGDALVFQLIKWD 212
                            89*********************9884.33.5568***************..555544..***********************99656 PP

                            EE..EEEEE- CS
                     B3  89 efelvvkvfr 98 
                            +f  +v ++r
  Cse_sc007247.1_g020.1 213 TF--KVYIIR 220
                            77..888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MVAPKKINYE ETRLLRLEEN KKRMAELKLT VLAQSLRTTS SPKPSPMKKV NRGPRKPVDL  60
STVRRSSRVA DKPPQVYKEE PIEPLGRRMS YGGNRVRDLS GRVYASDEDR EYASGRADEL  120
HSTLEPGFPS FVKPMLQSHV SGGFWLGLPV YFCKQNLPKR DELMTLVDED GDEWQAKYLP  180
RKTGLSGGWK GFAEAHKLAD GDALVFQLIK WDTFKVYIIR VNQAEDSNEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.18e-80B3 family protein