PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007247.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 655aa MW: 74132.9 Da PI: 4.9109

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007247.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.1	3.2e-11	504	546	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++WT+++ el+++a++q+G++ + I ++++ gRt++q+k ++ k Cse_sc007247.1_g030.1 504 MKWTKQDTELFYEAIQQFGTD-LSMIKECFP-GRTREQIKAKYKK 546 79*****************.*****.********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MDFDLDDLIS IDDANNVKAS TKFQPKLKPK PKPKPKPKPK PKPSSQPEPK PAPTPATQFV 60 EAPTIADNFL LGRTEEEQPG NDANRISANI NDDLQYSFDK LQQENAESVH TMDSPDDFFP 120 ESTTTAVNLP PCLETRTIHV SNDDTIEGPI EPGLTNNVDA STNFDSLAKI DPLTGEEAAI 180 YNENGEIGHI REPPNILAHS KTSAGPRFGK YKPKPKAQTR KLEHIASTRE HDVDSVQHVE 240 NIHLDPSKTD YMENEHVPMF TPDEILGASS IRATDAVPTE TISDYTLNVQ QIYLEEISQM 300 VYGNEGGRSS EKIERRSNKT FELIDEPEDE GYGDELIHRN ETNNDKDRDS GPESRSLKER 360 KGSKSKKSLD KTKKPARKRK KADEAVPSES TKVVKKKFTH STKRNKRQVN PELLKIPEDE 420 LELHMHNVPI KDVIRLMEHK ERLERKEAST SGTTAVNQSS SNPFDEDEAY AHGEGSADEH 480 DNSVVLHNAT HYNYGTHVRK RQTMKWTKQD TELFYEAIQQ FGTDLSMIKE CFPGRTREQI 540 KAKYKKEERR QPLRLNDALT IRAEGTSYFE AVIERLKQAQ AEEYDEDDPM NLVGEDDEEG 600 LPTHDINESG GATKPVQLEK EVKDMEPDVP AVESPTKSHD SEDELYRWSQ YKSEI

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MDFDLDDLIS IDDANNVKAS TKFQPKLKPK PKPKPKPKPK PKPSSQPEPK PAPTPATQFV  60
EAPTIADNFL LGRTEEEQPG NDANRISANI NDDLQYSFDK LQQENAESVH TMDSPDDFFP  120
ESTTTAVNLP PCLETRTIHV SNDDTIEGPI EPGLTNNVDA STNFDSLAKI DPLTGEEAAI  180
YNENGEIGHI REPPNILAHS KTSAGPRFGK YKPKPKAQTR KLEHIASTRE HDVDSVQHVE  240
NIHLDPSKTD YMENEHVPMF TPDEILGASS IRATDAVPTE TISDYTLNVQ QIYLEEISQM  300
VYGNEGGRSS EKIERRSNKT FELIDEPEDE GYGDELIHRN ETNNDKDRDS GPESRSLKER  360
KGSKSKKSLD KTKKPARKRK KADEAVPSES TKVVKKKFTH STKRNKRQVN PELLKIPEDE  420
LELHMHNVPI KDVIRLMEHK ERLERKEAST SGTTAVNQSS SNPFDEDEAY AHGEGSADEH  480
DNSVVLHNAT HYNYGTHVRK RQTMKWTKQD TELFYEAIQQ FGTDLSMIKE CFPGRTREQI  540
KAKYKKEERR QPLRLNDALT IRAEGTSYFE AVIERLKQAQ AEEYDEDDPM NLVGEDDEEG  600
LPTHDINESG GATKPVQLEK EVKDMEPDVP AVESPTKSHD SEDELYRWSQ YKSEI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	376	382	ARKRKKA
2	377	381	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-42	MYB_related family protein