PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007271.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family YABBY
Protein Properties Length: 212aa    MW: 23645.7 Da    PI: 8.0949
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007271.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY228.61.6e-7051742170
                  YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee.lleelkveeenlksnvek 88 
                            dv  sseq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+ +a+    + s+ + + +++  +++++++ +++  n+  
  Cse_sc007271.1_g010.1   5 DVAASSEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMGMAAAFHQSLSNSNSTSQDStAHHHTQKAPTHTPPNYRV 92 
                            67889***********************************************988888888777666652444555555565555544 PP

                  YABBY  89 e.esastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                            +  s+s+++s + + +++  +++  p+++rPPekrqrvPsayn+fikeeiqrika+nPdishreafs+aaknWahfP+ihfgl
  Cse_sc007271.1_g010.1  93 DlGSSSKYNSRMPM-RQSPASITSDPKINRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL 174
                            40444444444444.444556666799******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MSSIDVAASS EQLCYIPCNF CNIVLAVSVP CNSLFDIVTV RCGHCTNLWS VNMGMAAAFH  60
QSLSNSNSTS QDSTAHHHTQ KAPTHTPPNY RVDLGSSSKY NSRMPMRQSP ASITSDPKIN  120
RPPEKRQRVP SAYNQFIKEE IQRIKANNPD ISHREAFSTA AKNWAHFPHI HFGLMLDANN  180
HQAKLDEVSE LCAGIRETTQ IKDLIIQEMI KA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.11e-78YABBY family protein