PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007317.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARR-B
Protein Properties Length: 533aa    MW: 60219.4 Da    PI: 6.047
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007317.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like765.1e-24203256155
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            k+r++Wt +LH++Fv+av+ + G ek  Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  Cse_sc007317.1_g010.1 203 KARVVWTVDLHQKFVKAVNLI-GFEKVGPKKILDLMNVPWLTRENVASHLQKYRL 256
                            68*****************99.9*******************************8 PP
2Myb_DNA-binding37.36.2e-12205255148
                            TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                            r  WT ++++++v+av++ G +   +k+I   m+   +t++++ s++qky+
  Cse_sc007317.1_g010.1 205 RVVWTVDLHQKFVKAVNLIGFEkvGPKKILDLMNvPWLTRENVASHLQKYR 255
                            678***********************************************7 PP
3Response_reg78.91.7e-26221301109
                            EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHH CS
           Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeeda 86 
                            vl+vdD+p+ +++l+++l+k  y ev+++  + eal ll+e++  +D+++ D++mp+mdG++ll++   e  +lp+i+++  ge + +
  Cse_sc007317.1_g010.1  22 VLVVDDDPTWLKILEKMLKKCSY-EVTTCGLAIEALGLLRERKggFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRV 107
                            89*********************.***************999999**********************6644.8*************** PP

                            HHHHHTTESEEEESS--HHHHHH CS
           Response_reg  87 lealkaGakdflsKpfdpeelvk 109
                             + ++ Ga d+l Kp+ ++el++
  Cse_sc007317.1_g010.1 108 MRGVQHGACDYLLKPIRMKELRN 130
                            ********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 533 aa     Download sequence    
MTEGIHGFSS PRSDVFPAGL RVLVVDDDPT WLKILEKMLK KCSYEVTTCG LAIEALGLLR  60
ERKGGFDIVI SDVNMPDMDG FKLLEHVGLE MDLPVIMMSV DGETSRVMRG VQHGACDYLL  120
KPIRMKELRN IWQHVYRKKI HEVRDTESLE GLEEILMMRN VSEHSDDGNY LLCGGDITPG  180
KKRKDAELKY DEKDFSDHSS AKKARVVWTV DLHQKFVKAV NLIGFEKVGP KKILDLMNVP  240
WLTRENVASH LQKYRLYLTR LQKDDIKSTS SGLKLPEFSP RDAAGDRMEP IKVQQNEAVN  300
SYRTHSNPHV QNTSSKIQEV DFKCSTSLKP IKPKKILTGY AVDSHKASSS NIGISQSFGS  360
TEYSSFNTAL PTQYSWNGGY TEIQFKQEPA PQFQVQNGFS NIGLSTQQVQ STAHGQTLIK  420
ERDKPAKFGS FSLQPPDPVT SSTWRMKNDQ SLEPTSISNM ELSAFLLQGE HRSSTNLDMQ  480
NKGAPEFNDL EFIDEVPSDL YNALRFDEYP PDLLEYPPDL LDYPVIDQGL FIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-120ARR-B family protein