PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007348.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 425aa MW: 49006.2 Da PI: 9.3237

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007348.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	31.1	7.9e-10	90	170	7	89
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 A+++GF +++ ksk+ g ++ +f Cs++g++++e + ++ +r++++++++C +l k k + w + HnH++ Cse_sc007348.1_g010.1 90 AESIGFVIVIGKSKTD--RGYKYSIEFLCSRHGTSSREGLE-DELQRQTSTDKCNCPFRLLAKYIKaFNGWILRVTCPRHNHNF 170 899*******9998..5667***********9999.888999999*********999999**********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MNCTKLHKPH KSAQASQNCT SLTKLHKHKT HQFHRFHKLH KLHINNNQPA TATSGPDQQQ 60 QSTTMSSSPF NTQEVFGTEV DLINWVRSTA ESIGFVIVIG KSKTDRGYKY SIEFLCSRHG 120 TSSREGLEDE LQRQTSTDKC NCPFRLLAKY IKAFNGWILR VTCPRHNHNF PDSLHGFSQA 180 MRLKESGLVF VRQMTKQHVA LRIILSSIKE MDPNNVSTIK TVYNAQEKIR RDSRGDLTTI 240 QLLLVHLRRK GYTYYPRIND HTNELDEIFF VHPTSYALWT TYPEIMLMDS TYNTNMFKLP 300 FFTVVGVTPT NTTFSMAFSF LDKEKKANFK WVLECVKLVI QEQYYPRVIV TDRDLALLGA 360 CAEEFPNANR LLCRWHINQN MFSGIFVTGC EITIACLCRT LPINIAASAK QQHVELRPSR 420 VDEYE

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MNCTKLHKPH KSAQASQNCT SLTKLHKHKT HQFHRFHKLH KLHINNNQPA TATSGPDQQQ  60
QSTTMSSSPF NTQEVFGTEV DLINWVRSTA ESIGFVIVIG KSKTDRGYKY SIEFLCSRHG  120
TSSREGLEDE LQRQTSTDKC NCPFRLLAKY IKAFNGWILR VTCPRHNHNF PDSLHGFSQA  180
MRLKESGLVF VRQMTKQHVA LRIILSSIKE MDPNNVSTIK TVYNAQEKIR RDSRGDLTTI  240
QLLLVHLRRK GYTYYPRIND HTNELDEIFF VHPTSYALWT TYPEIMLMDS TYNTNMFKLP  300
FFTVVGVTPT NTTFSMAFSF LDKEKKANFK WVLECVKLVI QEQYYPRVIV TDRDLALLGA  360
CAEEFPNANR LLCRWHINQN MFSGIFVTGC EITIACLCRT LPINIAASAK QQHVELRPSR  420
VDEYE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	227	233	EKIRRDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-17	FAR1 family protein