PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007358.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 847aa MW: 95188.2 Da PI: 6.1937

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007358.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93	2.2e-29	547	597	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+i+le+l++yF++++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rkik++ Cse_sc007358.1_g030.1 547 EKTITLEMLRQYFAGSLKDAAKHLGVCPTTLKRICRQHGIQRWPSRKIKKV 597 79***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 847 aa Download sequence
MDDGVFSPNN MFGNPSDSMM DFEYMDELFV DGCWLQATDG SEYINNNNIN NPIFDTQFIW 60 PPFDFNNIDR VPEDVQEERA KSSILKNLSV SQSQTEDGIL SKSLVSNSFG FPNQSENFLE 120 SSETSRRWWI PPSVNIGVKE RLIYAIENIK HSALNKNTLI QIWLPENRGG KKVLSTSDEL 180 FSLGPDCPQL SNYRHISESY TFPAESNSKD IVGLPGRVYM GKVPEWTPDV RFFKDDEYPR 240 VTYAQQYDVR GSVAVPIFDQ NSQSCLGVIE VVMTTQKNNY TPEIEGVCKA LEAVDLRSSE 300 SSSSQKSEMT DGLYRAALPE IMEILKSACK THNLPLAQTW IPCTQQGKKG GCRHSDTNLI 360 HCISTVDLAC YVHDLRYKDF QEACSEHHLL KGQGVVGRAF KTNQPCYFPD VKLMTKTEYP 420 LSHHARIFNL CGVVAIRLRS TFTANVDYVL EFFLPVDCTD EEEQKSLLNS LSVIIQNVCR 480 SLRIVTDKEL LEEAPGSVQI VPKVEEILTD ITMDLIKQTN ESGSGEGSLV TDNVKRPERR 540 RGGSKTEKTI TLEMLRQYFA GSLKDAAKHL GVCPTTLKRI CRQHGIQRWP SRKIKKVGHS 600 LQKIQLVMDS VHGASGSFQI ESFYSNFPNL ASPDPKTNPK FQQLVDSKPT VGVTKLSVSP 660 SSSQTSSSGQ SSSSGTHPYP HPRTPTGEDI GSGSLKRARS DAELHVSLFS QDQDPKREPK 720 VFQRSHSHKS LTELPTTLPP KNGNNARDET VPRVKITYGE EKVRFRLQKD WGYNQLLVEI 780 AKRFSINEIS QFHLKYFDDD SEWVLLTCDA DLEECIEVYR SCNSGTIKLA LFEPQQVGGS 840 LGSNVAW

Sequence ? help Back to Top

Protein Sequence Length: 847 aa Download sequence

MDDGVFSPNN MFGNPSDSMM DFEYMDELFV DGCWLQATDG SEYINNNNIN NPIFDTQFIW  60
PPFDFNNIDR VPEDVQEERA KSSILKNLSV SQSQTEDGIL SKSLVSNSFG FPNQSENFLE  120
SSETSRRWWI PPSVNIGVKE RLIYAIENIK HSALNKNTLI QIWLPENRGG KKVLSTSDEL  180
FSLGPDCPQL SNYRHISESY TFPAESNSKD IVGLPGRVYM GKVPEWTPDV RFFKDDEYPR  240
VTYAQQYDVR GSVAVPIFDQ NSQSCLGVIE VVMTTQKNNY TPEIEGVCKA LEAVDLRSSE  300
SSSSQKSEMT DGLYRAALPE IMEILKSACK THNLPLAQTW IPCTQQGKKG GCRHSDTNLI  360
HCISTVDLAC YVHDLRYKDF QEACSEHHLL KGQGVVGRAF KTNQPCYFPD VKLMTKTEYP  420
LSHHARIFNL CGVVAIRLRS TFTANVDYVL EFFLPVDCTD EEEQKSLLNS LSVIIQNVCR  480
SLRIVTDKEL LEEAPGSVQI VPKVEEILTD ITMDLIKQTN ESGSGEGSLV TDNVKRPERR  540
RGGSKTEKTI TLEMLRQYFA GSLKDAAKHL GVCPTTLKRI CRQHGIQRWP SRKIKKVGHS  600
LQKIQLVMDS VHGASGSFQI ESFYSNFPNL ASPDPKTNPK FQQLVDSKPT VGVTKLSVSP  660
SSSQTSSSGQ SSSSGTHPYP HPRTPTGEDI GSGSLKRARS DAELHVSLFS QDQDPKREPK  720
VFQRSHSHKS LTELPTTLPP KNGNNARDET VPRVKITYGE EKVRFRLQKD WGYNQLLVEI  780
AKRFSINEIS QFHLKYFDDD SEWVLLTCDA DLEECIEVYR SCNSGTIKLA LFEPQQVGGS  840
LGSNVAW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein