PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007412.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 941aa MW: 102721 Da PI: 5.0192

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007412.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.7	5.7e-29	575	626	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk +gvc+T+LKriCRq+GI+RWP+Rki+++ Cse_sc007412.1_g040.1 575 AEKNVSLSVLQQYFSGSLKDAAKAIGVCPTTLKRICRQHGISRWPSRKINKV 626 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 941 aa Download sequence
MEYPSPPKDK PIGFWASPRA QMDNSVSMDG FARAEDPFNS FSELMNFDTY AGWCTSPSAA 60 DQMLASFALT AGYSSYELPN FPEQVKSGFI GTEVGQNSIN GGEFGLPVNS NDENGGSCQQ 120 KNVQENGTGI IHRSLQSQPL AEKMLKALSL FKDSSGAGIL AQVWVPIKEG DTYILSTCEQ 180 PYLLDQMLAG YREVSRGFKF SAEVKPGHFP GLPGRVFTSK VPEWTSNVAH YNKGEYLRIE 240 HALSHEIRGS IALPIFEDDS YENSCCAVLE LVTMKEKSDF SAEMDHVCRA LESVNLKSVA 300 PPRLHKQCLS KTQMAALTEI TDVLRAVCHA HRLPVALTWI PCRYNEKVGD ESINVRVGGC 360 NNNSTDKGIL CIETDACYVS EREMQGFVQA CSEHHLEEGQ GIAGKALQSN HPFFFPDVKE 420 YHISEYPLVQ HARKYGLNAA VAIRLRSTYT GDDDYILEFF LPASMKGSTE QQLLLNNLSS 480 TMQRICKSLR TVSDAELSGV GGSDVGLQQG LGESGLPLEL SRSGSEQKYM EESSIPGDQV 540 SGNAIDSTDI LIGARPPDQT AGGSRRQSEK KRSTAEKNVS LSVLQQYFSG SLKDAAKAIG 600 VCPTTLKRIC RQHGISRWPS RKINKVNRSL KKIQTVLDSV QGVEGGLKFD PTTGGLVAAN 660 TVIQDLDAQK SPTLSNNSPE GASPCLPSSC LNSENPIVKL EDDCYMGIDN LRPSNSLPVT 720 TSMGEFCSDS LKMAALDSAK TVPWTFSPKG CSQPIDGQMK VDKSNHNFLS HSWSSIAAGD 780 DMDTSMNDND AIDDHNQSTS SGMTESSNGS LMNGSSSSSP SFSGLKNPKT ETSFGDEGSK 840 LTVKATYKED TVRFKFDPTC GCFQLYEEVA KRFKIQTGTF QLKYKDDEEE WVLLVCESDW 900 NECLEILDYL GTRSVKFLVR DATFAMGSSG SSNCCFLMGG S

Sequence ? help Back to Top

Protein Sequence Length: 941 aa Download sequence

MEYPSPPKDK PIGFWASPRA QMDNSVSMDG FARAEDPFNS FSELMNFDTY AGWCTSPSAA  60
DQMLASFALT AGYSSYELPN FPEQVKSGFI GTEVGQNSIN GGEFGLPVNS NDENGGSCQQ  120
KNVQENGTGI IHRSLQSQPL AEKMLKALSL FKDSSGAGIL AQVWVPIKEG DTYILSTCEQ  180
PYLLDQMLAG YREVSRGFKF SAEVKPGHFP GLPGRVFTSK VPEWTSNVAH YNKGEYLRIE  240
HALSHEIRGS IALPIFEDDS YENSCCAVLE LVTMKEKSDF SAEMDHVCRA LESVNLKSVA  300
PPRLHKQCLS KTQMAALTEI TDVLRAVCHA HRLPVALTWI PCRYNEKVGD ESINVRVGGC  360
NNNSTDKGIL CIETDACYVS EREMQGFVQA CSEHHLEEGQ GIAGKALQSN HPFFFPDVKE  420
YHISEYPLVQ HARKYGLNAA VAIRLRSTYT GDDDYILEFF LPASMKGSTE QQLLLNNLSS  480
TMQRICKSLR TVSDAELSGV GGSDVGLQQG LGESGLPLEL SRSGSEQKYM EESSIPGDQV  540
SGNAIDSTDI LIGARPPDQT AGGSRRQSEK KRSTAEKNVS LSVLQQYFSG SLKDAAKAIG  600
VCPTTLKRIC RQHGISRWPS RKINKVNRSL KKIQTVLDSV QGVEGGLKFD PTTGGLVAAN  660
TVIQDLDAQK SPTLSNNSPE GASPCLPSSC LNSENPIVKL EDDCYMGIDN LRPSNSLPVT  720
TSMGEFCSDS LKMAALDSAK TVPWTFSPKG CSQPIDGQMK VDKSNHNFLS HSWSSIAAGD  780
DMDTSMNDND AIDDHNQSTS SGMTESSNGS LMNGSSSSSP SFSGLKNPKT ETSFGDEGSK  840
LTVKATYKED TVRFKFDPTC GCFQLYEEVA KRFKIQTGTF QLKYKDDEEE WVLLVCESDW  900
NECLEILDYL GTRSVKFLVR DATFAMGSSG SSNCCFLMGG S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein