PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007416.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 150aa    MW: 17232.4 Da    PI: 9.2944
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007416.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM119.43.5e-3791281128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrF Ptdeelvv++L++k++  + +  ++i+++d+y ++PwdL+ k+  e k+wy++s+r         +nr+t++gyW++ g 
  Cse_sc007416.1_g020.1   9 LPPGFRFCPTDEELVVHFLQRKASLLPYHP-DIIPDLDLYPFDPWDLDGKAMVEGKKWYYYSRRT--------QNRITTNGYWQSLGC 87 
                            79*************************998.89**************977777899******984........589999********* PP

                    NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            d++++s+ +++ vg+kk  vf+ g+ap+g+kt+W+m+e+rl
  Cse_sc007416.1_g020.1  88 DEQIMSSsSSKRVGVKKYYVFHIGEAPEGVKTNWIMQEFRL 128
                            *****9967788***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MADNNNVNLP PGFRFCPTDE ELVVHFLQRK ASLLPYHPDI IPDLDLYPFD PWDLDGKAMV  60
EGKKWYYYSR RTQNRITTNG YWQSLGCDEQ IMSSSSSKRV GVKKYYVFHI GEAPEGVKTN  120
WIMQEFRLSD GSSSSSSSGR SKRKGHSKTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.14e-57NAC family protein