PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007442.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 248aa MW: 28437.5 Da PI: 8.0386

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007442.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.5	3.2e-10	47	98	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++E++RR+ +N+ + L +l+P++ + ++ + a+i+ A+ ++k+L+ Cse_sc007442.1_g030.1 47 QRMNHIAVEKNRRKMVNEHLGVLHSLMPER---YIQRFDQASIVGGAISFVKELE 98 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MGHNTIFANS CHENSQENNQ NVLLEGGRRR RRKKQKVCKS NEEEESQRMN HIAVEKNRRK 60 MVNEHLGVLH SLMPERYIQR FDQASIVGGA ISFVKELEHH LQALEAKKFT LTQQQKQDAI 120 IHDPNGDIES EMPQLPLYFR KLFSLPQYTW SQLPYENNLS KSNSTIANIQ VNLVNEHANL 180 RILMRKQLTQ LSKIVGFLET SCLTILHLNV TTLDPFVLYS ISLKVEEGCG LDSADEIANA 240 VHRILGLI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	27	35	GRRRRRKKQ
2	28	34	RRRRRKK
3	55	61	EKNRRKM
4	56	61	KNRRKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	6e-55	bHLH family protein