PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007477.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 256aa MW: 28951.5 Da PI: 6.8007

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007477.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	80	3.8e-25	43	140	2	102
HHHHHHHHHCTGGGTTTSEESSSS......SEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEE CS HSF_DNA-bind 2 Flkklyeiledeelkeliswseng......nsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkh 83 F++kly+++ ++e++++isw n +sf++++++ef +kvLp + k +nf SFv QLn YgFkk++ + e++h Cse_sc007477.1_g060.1 43 FVNKLYNVVCNKETDSIISWVPNLnvsdgaKSFAIWNTDEFIDKVLPLMSKSKNFDSFVTQLNNYGFKKMSWDC---------REYAH 121 9*****************85533566679************************************988.........57* PP SXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 84 ksFkkgkkellekikrkks 102 ++F++gk +ll+++kr+++ Cse_sc007477.1_g060.1 122 EWFQEGKPHLLKNVKRRRK 140 ****************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MEGIDVDETM VVSDISEGFS SGDGDELLAE PMRGVRNGAL PPFVNKLYNV VCNKETDSII 60 SWVPNLNVSD GAKSFAIWNT DEFIDKVLPL MSKSKNFDSF VTQLNNYGFK KMSWDCREYA 120 HEWFQEGKPH LLKNVKRRRK QILSESEKLQ GEIKKLESAS KEQYNELNAF KSYVDNTISN 180 QKRILQTMAR AIKSTIDQHH QVRKMHGVEN NNDATQNSTL VGQQSHKTSV LGESSLAPSY 240 EIQAEDKSAK NITKGN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	138	LKNVKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G54070.1	2e-27	HSF family protein