PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007537.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 177aa    MW: 20154.1 Da    PI: 9.7686
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007537.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.83.7e-52421651128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhP+deelv++yL +k++ ++ +l   + evd++k+ePwdLp+++  + kewyf+s+rd+kyatg r+nrat sgyWkatgk
  Cse_sc007537.1_g030.1  42 LPPGFRFHPRDEELVCDYLFNKLSLSDSHL---LVEVDLNKCEPWDLPETACVGGKEWYFYSQRDRKYATGLRTNRATVSGYWKATGK 126
                            79**********************999666...99*************7777799********************************* PP

                    NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            d+++++ +++lvg++ktLvfy grapkg+ktdWvmhe+rl
  Cse_sc007537.1_g030.1 127 DRSIFR-NRTLVGMRKTLVFYLGRAPKGKKTDWVMHEFRL 165
                            ******.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
VCNLALSPPI SNYTTTHKVK LSTHTSSHRS VMSNLSLVEA TLPPGFRFHP RDEELVCDYL  60
FNKLSLSDSH LLVEVDLNKC EPWDLPETAC VGGKEWYFYS QRDRKYATGL RTNRATVSGY  120
WKATGKDRSI FRNRTLVGMR KTLVFYLGRA PKGKKTDWVM HEFRLQGSLA PPVDSSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.25e-80NAC family protein