PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007566.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 147aa    MW: 16649.1 Da    PI: 7.5741
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007566.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH223e-071458653
                           HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                    HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
                            ++E++RRd++++ +++L +ll  +   + ++      LekA++ Ik+
  Cse_sc007566.1_g040.1 14 AAMEKQRRDQMKHLYSKLASLLRLQ---SYERIPLLGLLEKATDSIKQ 58
                           589*********************9...9999************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MKRPSGSSSL QSPAAMEKQR RDQMKHLYSK LASLLRLQSY ERIPLLGLLE KATDSIKQWK  60
ETVDRLTARK EELENELTGA MSKESNLHVV QVSEMDSNLE VNLIIQASNK KIELCQVLSI  120
IEQGGAEIIN YSFSCMGQNT HYTIHAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.14e-16bHLH family protein