PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007575.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

GATA

Protein Properties

Length: 509aa MW: 56364.1 Da PI: 7.0179

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007575.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	39	1.1e-12	2	31	6	35
GATA 6 ttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 tt TplWR+gp ++ LCnaCG ++r kg+ Cse_sc007575.1_g020.1 2 TTGTPLWRNGPPDKPVLCNACGSRWRTKGS 31 899******55555*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MTTGTPLWRN GPPDKPVLCN ACGSRWRTKG SLVNYFPLQS RSERDMFEDR RVSKVKTISL 60 KNKEAKLLKR KGSFENVLGG SSSMLGCGDG GALTPSHHHH HPSIFKGLDE DTSNRSSSGS 120 AISNSDSCMQ LGSADASDLT GPSQSSIVWD TMVPSRKRTC FDKPKQSPVE KLTRDLYTIL 180 HEQQSYFSGS SEELIFESDT PMVSVEIGHG SVLIRHPNSA AREEESEASS LSFDTKNEAY 240 STNKSGNFSS RGNDKSKMQV NQDQFNKDNE EKLPILVNHN SPLCKIDLKD IINFEKFTSQ 300 MTNDEKQLLV QYLPPTDNVQ SPDSIRSMFD SPQFEESLLA FQKLLTEGNF DPSAPAMKSE 360 ESKTLKKLAL CNMTKCKWVE QYNLLQDTKC KKDNRGSVVT GGANTISPNC LVNVQKSNQI 420 NSIPGMKNTC KSSKGAFKKA SKEHKEVVDN DGRAFSPRSL FTLPPDNSGI MLDYTKYADE 480 NSDQDLLLDV PSNTSFPQAE LLPTSSMTN

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MTTGTPLWRN GPPDKPVLCN ACGSRWRTKG SLVNYFPLQS RSERDMFEDR RVSKVKTISL  60
KNKEAKLLKR KGSFENVLGG SSSMLGCGDG GALTPSHHHH HPSIFKGLDE DTSNRSSSGS  120
AISNSDSCMQ LGSADASDLT GPSQSSIVWD TMVPSRKRTC FDKPKQSPVE KLTRDLYTIL  180
HEQQSYFSGS SEELIFESDT PMVSVEIGHG SVLIRHPNSA AREEESEASS LSFDTKNEAY  240
STNKSGNFSS RGNDKSKMQV NQDQFNKDNE EKLPILVNHN SPLCKIDLKD IINFEKFTSQ  300
MTNDEKQLLV QYLPPTDNVQ SPDSIRSMFD SPQFEESLLA FQKLLTEGNF DPSAPAMKSE  360
ESKTLKKLAL CNMTKCKWVE QYNLLQDTKC KKDNRGSVVT GGANTISPNC LVNVQKSNQI  420
NSIPGMKNTC KSSKGAFKKA SKEHKEVVDN DGRAFSPRSL FTLPPDNSGI MLDYTKYADE  480
NSDQDLLLDV PSNTSFPQAE LLPTSSMTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-103	GATA family protein