PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007602.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 165aa    MW: 18116 Da    PI: 10.4734
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007602.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY28.62.9e-0999123330
                            -SS-EEEEEEE--TT-SS-EEEEEE-ST CS
                   WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa 30 
                            D+ +WrKYGqK++kgs +pr   rC  a
  Cse_sc007602.1_g060.1  99 DENSWRKYGQKPIKGSLHPR---RCKIA 123
                            8889****************...56655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MMYRRSSNSG MSLSSGISLN FDSSTCTPTM SSNRLIGSSR SADQATYQHK KRCSVRGDDG  60
SVKCGSSGRC HCSKKRKHRI KRSIKVPAIS NKLADIPPDE NSWRKYGQKP IKGSLHPRRC  120
KIANYCVLTG MLFCCALCIS GTSTCEYMFI VAVGVLMASA GHRKH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.18e-25WRKY family protein