PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007632.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARR-B
Protein Properties Length: 513aa    MW: 57672.3 Da    PI: 8.1098
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007632.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.18e-28210263155
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            kpr++Wt+eLH++Fv+av+++ G +kA+Pk+ilelm+++gLt+e+v+SHLQkYR+
  Cse_sc007632.1_g040.1 210 KPRVVWTQELHSEFVKAVNRI-GYQKAVPKKILELMNIPGLTRENVASHLQKYRI 263
                            79*******************.9*******************************7 PP
2Myb_DNA-binding39.11.7e-12212262148
                            TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                            r  WT+e++  +v+av++ G     +k+I + m+  g+t++++ s++qky+
  Cse_sc007632.1_g040.1 212 RVVWTQELHSEFVKAVNRIGYQkaVPKKILELMNiPGLTRENVASHLQKYR 262
                            678*****************99****************************7 PP
3Response_reg86.11e-28301381109
                            EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHH CS
           Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeeda 86 
                            vl vdD+p+ ++ll+++le  +y +v++++ +++al++l++ +  +D++l+D+ mp+mdG++ll+ ir+e  +lp+i+++a ++ + +
  Cse_sc007632.1_g040.1  30 VLAVDDDPTCLMLLKKMLETCKY-RVTTCTRAKDALTILRRDRskYDVVLCDVHMPDMDGHKLLEYIRFEM-DLPVIMMSADEKLSVV 115
                            799********************.***************888778************************77.**************** PP

                            HHHHHTTESEEEESS--HHHHHH CS
           Response_reg  87 lealkaGakdflsKpfdpeelvk 109
                             + +  Ga d+l Kp+ +e+l++
  Cse_sc007632.1_g040.1 116 MKGVIHGACDYLIKPVGMEALRN 138
                            ********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    
MKRENLVKKQ SHEDEDDDVK VYVFPEGLRV LAVDDDPTCL MLLKKMLETC KYRVTTCTRA  60
KDALTILRRD RSKYDVVLCD VHMPDMDGHK LLEYIRFEMD LPVIMMSADE KLSVVMKGVI  120
HGACDYLIKP VGMEALRNIW QHVIRKKNEV QKDLEPSTSL SSSVCQQKQP ETPDKSSANK  180
GQSGIKRRKD DDDDDDAESE KIEDSSSIKK PRVVWTQELH SEFVKAVNRI GYQKAVPKKI  240
LELMNIPGLT RENVASHLQK YRIYLKRIHK EHQSDPNSTL FKGNLGAGYR SLSTLSEQEF  300
QALVASGHIV PAQSVAANQP VALDRSANMR TPNSLPRIDQ QRFFSIQNQT VAYAQVQNQH  360
GHSSHISKQP AGLQHSFTGM NSPTMIPVTH NHASRVPILP DGMINNPAVL QPTAFVKIAN  420
HRTESTGNSF LVRNSSGNFS IFSTSTLQSE GYVPCYSLSN NPDQNIPHHS GLQGNIRGGY  480
SQEEFIAFLR QVQQQQGVGH AEKTFYSLDD LPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.11e-103ARR-B family protein