PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007644.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 752aa MW: 85385.1 Da PI: 9.3568

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007644.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.9	3.9e-09	20	98	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 A+ +GF ++k+++k++ ng++ + +++C+k g e + + +r++++++ +C +l+ k + + +w + HnHel Cse_sc007644.1_g020.1 20 ASGLGFVIVKKRTKSE--NGQMFEINYKCTKGGIYEYHGSG----KRKTKTKKSNCPFRLVAKYRPtQYNWILRVKCDSHNHELL 98 6778999999987666..999*************98877....899999**********9788888888889***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MYFQAFRSHE EVTEWVQIIA SGLGFVIVKK RTKSENGQMF EINYKCTKGG IYEYHGSGKR 60 KTKTKKSNCP FRLVAKYRPT QYNWILRVKC DSHNHELLES LHGVPYAMRL KDDELSLVKE 120 LSEYSVPPRN ILSTIKGRNP DNVSSVRTIY NALDKFRRAR VGDRTQIQVL YSHLVDSGYA 180 YYPRVNDYNE LEELFFVHPT SNALWHAKRL IGRRYNDATV QGDMKVWPFK IIEGQIGKPI 240 IVVAYKGVKK QFAAEEISSM VLAKMKEVAN AYLNTNVKSA VITVPAYFND SQRQATKDAA 300 TVAGLDVLRL LNEPTAAAIA YGLYKKATII TELNVLIFDL GGGTFDVSLL TIDNGRFEVK 360 AAAGDTHLGG EDFDNRMVEY FVTEFNRKYK KDISSNSRAL GRLRVASERA KRILSSTTQT 420 FIEIDCLYDG VDFSSKITRA KFEELNVDFF NKCVETVKMC LKDAKLDKSR VDEVVIVGGS 480 TRIPKVQRML QDLFDGKDLC KTINPDEAVA YGAAVLAAHL SGKGNQMVQD LMLVDVTPLS 540 LGVESPGKVM SVLIPRNTPI PVTKEQMRRT VYDYQSSMLF QIYQGERSKS TKNNFLGEFE 600 LSNIPLAPKG VTKANVRFDI DADGILEVSA REPLKGQKNN IKITNDKMRL SKEEIEKMLE 660 DAMRFSIEDQ EYKKKVDAYN ALEDYVYVMK TKVNDVNIRN RLSQRDVKKM DDVMEEALLW 720 LELNKQAEIN VIADKNKELK RLCNSIVGQF TS

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MYFQAFRSHE EVTEWVQIIA SGLGFVIVKK RTKSENGQMF EINYKCTKGG IYEYHGSGKR  60
KTKTKKSNCP FRLVAKYRPT QYNWILRVKC DSHNHELLES LHGVPYAMRL KDDELSLVKE  120
LSEYSVPPRN ILSTIKGRNP DNVSSVRTIY NALDKFRRAR VGDRTQIQVL YSHLVDSGYA  180
YYPRVNDYNE LEELFFVHPT SNALWHAKRL IGRRYNDATV QGDMKVWPFK IIEGQIGKPI  240
IVVAYKGVKK QFAAEEISSM VLAKMKEVAN AYLNTNVKSA VITVPAYFND SQRQATKDAA  300
TVAGLDVLRL LNEPTAAAIA YGLYKKATII TELNVLIFDL GGGTFDVSLL TIDNGRFEVK  360
AAAGDTHLGG EDFDNRMVEY FVTEFNRKYK KDISSNSRAL GRLRVASERA KRILSSTTQT  420
FIEIDCLYDG VDFSSKITRA KFEELNVDFF NKCVETVKMC LKDAKLDKSR VDEVVIVGGS  480
TRIPKVQRML QDLFDGKDLC KTINPDEAVA YGAAVLAAHL SGKGNQMVQD LMLVDVTPLS  540
LGVESPGKVM SVLIPRNTPI PVTKEQMRRT VYDYQSSMLF QIYQGERSKS TKNNFLGEFE  600
LSNIPLAPKG VTKANVRFDI DADGILEVSA REPLKGQKNN IKITNDKMRL SKEEIEKMLE  660
DAMRFSIEDQ EYKKKVDAYN ALEDYVYVMK TKVNDVNIRN RLSQRDVKKM DDVMEEALLW  720
LELNKQAEIN VIADKNKELK RLCNSIVGQF TS