PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007650.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 176aa    MW: 19993.2 Da    PI: 4.4714
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007650.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.11.2e-0775132152
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......teker 52 
                            ++Y++YA+  GF+++k+ ++ + ++g +  +  +C+keg +++ + +       ++++r
  Cse_sc007650.1_g020.1  75 DMYSTYAEAGGFQIKKAGQRLT-KSGIVQAKYIMCNKEGAPRHINVDtldpkhsEKQKR 132
                            58***************99888.7887999999*******9998877565543222222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MSPVDETDLI EVPVDESQDK DDGVNETTDS MRSLRPTLYE HTETPGGSIY WEPHVEGIVV  60
PEEGKYYDTI EEAIDMYSTY AEAGGFQIKK AGQRLTKSGI VQAKYIMCNK EGAPRHINVD  120
TLDPKHSEKQ KRNTTLHYKV EESELVAMFW ADEVAKCNYK EFGDIVSFDA TFRSNK