PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007700.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 260aa    MW: 28868.4 Da    PI: 8.4555
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007700.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.16.9e-21106156255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                            +y+GVr+++ +g+++AeIrdp   + k +r++lg+f+ta eAaka+++a+ kl+g
  Cse_sc007700.1_g030.1 106 HYRGVRQRP-WGKFAAEIRDP---NkKGTRVWLGTFDTAIEAAKAYDRAAFKLRG 156
                            8********.**********9...4345*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MSFTNESSTL DLIRQHLLID DQSFLQTYSL SFENNSIKTE FANNSCFGHN LETSTSNSNC  60
TSTTSSNSSF KKRKRSLNIS NISIPFPPPT VVKETVKQEE FEERKHYRGV RQRPWGKFAA  120
EIRDPNKKGT RVWLGTFDTA IEAAKAYDRA AFKLRGSKAI LNFPLEVGYS VVPPPGVTIT  180
SRKRAADEIE VESVRKEPKV EPVTAEFDGV KSDNGVVPLT PSSWTAVWDF GDGNGKGIFE  240
VPPLSPYPNM NFSSGCIVSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17176KKRKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.14e-51ERF family protein