PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007709.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARF
Protein Properties Length: 805aa    MW: 89117.2 Da    PI: 7.4988
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007709.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.61.4e-24162263199
                            EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 
                            f+k+lt sd++++g +++p++ ae++      + +++ s++l+ +d++g +W++++iyr++++r++lt+GW++Fv++++L +gD v+F
  Cse_sc007709.1_g020.1 162 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSNFVSQKNLVSGDAVLF 248
                            99****************************963.3445679*********************************************** PP

                            EE-SSSEE..EEEEE-S CS
                     B3  83 kldgrsefelvvkvfrk 99 
                               + +++el+++ +r+
  Cse_sc007709.1_g020.1 249 L--RGEGGELRLGTRRA 263
                            *..44999999999986 PP
2Auxin_resp103.92e-34288369182
             Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                            +a+a+s +++F+v+Y+Pr+ +++Fvv+++k+++ +++ +++G+Rfkm+f +++s+err+ Gtv+g+ d+dp++Wp+SkWr+L
  Cse_sc007709.1_g020.1 288 VAKAVSANTAFDVFYSPRSNRADFVVPYSKYMNCISNMITIGTRFKMRFSMDESPERRFRGTVIGLGDMDPYKWPKSKWRCL 369
                            6899*****************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 805 aa     Download sequence    
MEIDLNHVVS GTEVGNGVHS VESCGGSSLS ASSNSSNLSS KSAKSTNFES SIYMQLWHAC  60
AGPLTTLPNK GNVVVYFPQG HLEQIASHSC NHVSIIDVNS LGLHPQVFCK VVDVHLLANK  120
ENDEIYTKLT LLPAPEWTGK DLQQGEEEGG DVTLTKSPRQ MFCKTLTASD TSTHGGFSVP  180
RRAAEDCFPP LDYKQQRPSQ ELVAKDLHGV EWKFRHIYRG QPRRHLLTTG WSNFVSQKNL  240
VSGDAVLFLR GEGGELRLGT RRATRPRTYL PDTTIPNSSS FKDILAPVAK AVSANTAFDV  300
FYSPRSNRAD FVVPYSKYMN CISNMITIGT RFKMRFSMDE SPERRFRGTV IGLGDMDPYK  360
WPKSKWRCLT VRWDEDVGNN NQEQISPWEI DLSGSSVPLL NIHASPRFKR MRENLHSAPS  420
EHPVAGWGGC LDFEESTRSS KVLQGQENIG GHTMNTSVNF GLQPSMHPRF SPNQMVLTGR  480
STNIMMSRHQ SVSTTPNPAF LGSNNNRFPK VLQGQEICSL SSFTENTSGS WGPPRTAPNM  540
HQRLNNPNFY PLGSEGGRNF FFQNPAPVMP PISFPINRAG FENGVMRNDI NGLQIRLQPR  600
PPVELGSIAT SDPVVPVQGN SGSEKDDGGS DSNGSSCKLF GFQLNGAHPM VDAQSLSKRS  660
CIKVHKQGNK VGRAIDLSKM SNYEELFSEL ESLFHMEGIL SSRDGAWRLL YTDEENDMMV  720
VGDDPWDEFA RMATKIHIYT KEEVEKLMSG GVISDDTSCL EEAPAMVDTA KSSPLGVQKP  780
TRAIFDDLAS KLRAHKPSRK THESR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60450.10.0ARF family protein