PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007718.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family TCP
Protein Properties Length: 298aa    MW: 33928.3 Da    PI: 10.1287
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007718.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP121.88e-38942421134
                    TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..ssssasec.eaesssssasns 85 
                            aa kkdr+ski T++g+RdRRvRls+++ ++fF Lqd LGfdk+skt++WL++++++ai +l++    +ss+ +  ++ +++ +++ +
  Cse_sc007718.1_g030.1  94 AASKKDRNSKIFTAQGPRDRRVRLSIDISKKFFGLQDLLGFDKASKTLDWLFTKSETAIVDLVQEmkHTSSS-NLsDQCEEVFMKG-D 179
                            589**************************************************************7522222.2223333333333.2 PP

                    TCP  86 ssg.............kaaksaakskksqksaasalnlak..esrakarararertrekmrikn 134
                            +++             +  k+++k+ ++qk    + n+a+  + ra+ararar rt e+ rik+
  Cse_sc007718.1_g030.1 180 QIEqkgkkkkvvakcfNVGKKKKKTAQKQKFGF-HVNVAArsQLRAEARARARVRTMENLRIKK 242
                            222244456778666522222222222222222.33344324777***************9995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MFNSSNPFPS SCHGFHPPSG FISCQEKDGG YYNHHPFVAQ DCSFNHAPSP SPPPIRESHL  60
ENHDKNNHNY SNGHDHNHLN LSDSVISPPR KRVAASKKDR NSKIFTAQGP RDRRVRLSID  120
ISKKFFGLQD LLGFDKASKT LDWLFTKSET AIVDLVQEMK HTSSSNLSDQ CEEVFMKGDQ  180
IEQKGKKKKV VAKCFNVGKK KKKTAQKQKF GFHVNVAARS QLRAEARARA RVRTMENLRI  240
KKLYNDAKNV IGDSNYCYLQ SQSNPEVKIG ESFVEQKIPK PYSLLYNTKH NHVESKED
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186203KKKKVVAKCFNVGKKKKK
2186207KKKKVVAKCFNVGKKKKKTAQK
3187204KKKKVVAKCFNVGKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.15e-24TCP family protein