PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007758.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 197aa    MW: 22686.6 Da    PI: 7.4984
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007758.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK68.59.6e-2252101352
                 RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                            k+ + e +++y+++pi++AAk+ +++ T+ K++CR++GI+RWP+Rk++s+
  Cse_sc007758.1_g030.1  52 KNTRREIIAQYYYMPIAKAAKKFNIGITIFKKRCRELGIQRWPYRKLTSI 101
                            5667889****************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MIPDDDVNPI DDQKKKRLDI EDYDAEIDMT HADDDQGEAS IPIVKKTVIV RKNTRREIIA  60
QYYYMPIAKA AKKFNIGITI FKKRCRELGI QRWPYRKLTS IQLLINTIQA KNGRAKVDGN  120
TQQIITRLQE EKKCVEENPE LEFSKSTKRR KSMSLILSLT NQPTTSAATE LHYSYETSSA  180
EHTNSKDGYD SDCSEHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66990.14e-29Nin-like family protein