PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007764.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 335aa MW: 37698.7 Da PI: 5.9916

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007764.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.4	4e-30	126	186	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK++ g++fprsYYrCt++ +C+++k+v+r++edp+v+eitY+g+H+++ Cse_sc007764.1_g010.1 126 DDGYSWRKYGQKDILGAKFPRSYYRCTYRyvhNCMARKQVQRTDEDPTVFEITYRGQHTCN 186 8*************************9999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MDTSARIINE LTQGMELAKQ LKSILNSDAS PEEKHFLIQA IIASYDRALV MVNWGDSGGQ 60 TPPLAPLMLS QPESSVSIDE SPRSGEYDQA FDNQDQRVVS KKRKAMPTWK NQIRISTDTG 120 LEGNTDDGYS WRKYGQKDIL GAKFPRSYYR CTYRYVHNCM ARKQVQRTDE DPTVFEITYR 180 GQHTCNPATA AVAPPKSPEK HEIKQNNHHH ILQLPPPPKS GDMLTNLREN LRVSTSDLDT 240 TVPCSFSFPS ASFGCVDNYQ QFHFTNETDN NFLQGYSPSG SNYFTEWGND FQHHDDSNLS 300 GMISTTASAT NSPLAFPTDP QDLRTSFPFN SGFFI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	96	104	QRVVSKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	4e-56	WRKY family protein