PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007772.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 211aa    MW: 24289.7 Da    PI: 9.3846
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007772.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.22.9e-0926106789
                   FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                            A+++GF +++ ksk+    g  ++ +f Cs++g++++e  + ++ +r++++++++C  kl  k  k ++ w +      HnH++
  Cse_sc007772.1_g030.1  26 AESIGFVIVIGKSKTD--RGYKYSIEFLCSRHGTSSREGLE-DELQRQTSTDKIKCLFKLLAKFIKrQNGWILRVKCPGHNHNF 106
                            899*********9998..5667***************9999.888999999************999788888888889****86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MSSSPFNTQE VFGTEVDLIN WVRSTAESIG FVIVIGKSKT DRGYKYSIEF LCSRHGTSSR  60
EGLEDELQRQ TSTDKIKCLF KLLAKFIKRQ NGWILRVKCP GHNHNFPDSL HGFSQAMRLK  120
ESELVFVRQM TKQHVAPRII LSSLKEMDPN NVSTIKTVYN AQENIRRDSG GDLTPIQLLL  180
VHLQRKGYTY YPRINDHTNE LDEIFFVHPT S