PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007867.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 165aa    MW: 19735.2 Da    PI: 5.6046
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007867.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR166.57.1e-2146137290
                   FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtklele 84 
                            fY++YA++ GF vrk++s  +  n+++ +r+  C + gk+  +  + +k +r+r++++++C+a+++v+ ++      ++w++t++ ++
  Cse_sc007867.1_g030.1  46 FYKSYARQHGFAVRKDRSDVR--NNQVRRRDILCHRAGKKPLKLIDPSKDQRNRESQKCECNAHIRVTWKQgfdifPEEWHITTFIKD 131
                            9***************98876..777*****************9999*********************9987766679********** PP

                   FAR1  85 HnHela 90 
                            HnH+l 
  Cse_sc007867.1_g030.1 132 HNHHLL 137
                            ***996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MLDLDLNKCP NEEDDGNSIE ELVDETSENE PFIGQTFLTF EEAYIFYKSY ARQHGFAVRK  60
DRSDVRNNQV RRRDILCHRA GKKPLKLIDP SKDQRNRESQ KCECNAHIRV TWKQGFDIFP  120
EEWHITTFIK DHNHHLLRQE EMPFLPINRI ITPEDEYQIL LYKDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.13e-31FAR1 family protein