PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007899.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 279aa    MW: 31700 Da    PI: 10.1269
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007899.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM135.53.7e-42291651128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrF+Ptd+e+v +yL +kv + +l+++ v + v+i+k++PwdLp      ek+ yfFsk++ ky + +r+nr+ ++gyWkatg 
  Cse_sc007899.1_g010.1  29 LPPGFRFQPTDQEIVFQYLIRKVFSCPLPASIVPEIVNICKFNPWDLPGD---WEKDRYFFSKKEAKYGNAQRSNRVSDNGYWKATGF 113
                            79****************************5555555***********44...46789****************************** PP

                    NAM  89 dkevlsk.........kgel..vglkktLvfykgrapkge...ktdWvmheyrl 128
                            dk++++          +  +  +g+kktLvfykg+  +ge   +t+W+mheyrl
  Cse_sc007899.1_g010.1 114 DKQITRCcnnnpnsrrR--EiiTGMKKTLVFYKGKPMNGEattRTNWIMHEYRL 165
                            ****9986666655444..1569*********9988877655599*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MSTHQNEQVD NVNMKISKLN FVRDGAIRLP PGFRFQPTDQ EIVFQYLIRK VFSCPLPASI  60
VPEIVNICKF NPWDLPGDWE KDRYFFSKKE AKYGNAQRSN RVSDNGYWKA TGFDKQITRC  120
CNNNPNSRRR EIITGMKKTL VFYKGKPMNG EATTRTNWIM HEYRLVHPSC APKTNSNDKG  180
SWIQMGNWVL CHIFLNKRSR KVGSKDVKAI SSGLTPQKEL LHHGFMIRND GMHVIHDVSS  240
SSSLSSSSSS SSSCGSSVVT HEVSSSRKPL DHEDIKNNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.11e-63NAC family protein