PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007902.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 256aa    MW: 28821.2 Da    PI: 6.5629
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007902.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.22.3e-18160194135
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                            C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  Cse_sc007902.1_g030.1 160 CTHCASDKTPQWRTGPLGPKTLCNACGVRYKSGRL 194
                            *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MDIYGQDVFG VDEFLDFSGD DDVFSSSADT EVVYNSSTDC GSYYQCSFND HNNSTSATDF  60
TDHFCVPTED VAELEWLSNF VNNSYTNFPA NNIAGTINFQ PQNQSINSKS RSKRTRTPSH  120
NTTWTSASTL TQISNTNNIS ESSSSSDTSS ENYNNIVRKC THCASDKTPQ WRTGPLGPKT  180
LCNACGVRYK SGRLVPEYRP AASPTFVLTK HSNSHRKVME LRRQKEMSSG HYHHHKYQLQ  240
SEHQMYGHHG SNYEVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.14e-59GATA family protein