PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007911.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARR-B
Protein Properties Length: 491aa    MW: 54469.5 Da    PI: 6.3529
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007911.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like902.2e-28198251155
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gL++e+v+SHLQkYRl
  Cse_sc007911.1_g010.1 198 KPRVVWSVELHQQFVSAVNQL-GIDKAVPKKILELMNVPGLSRENVASHLQKYRL 251
                            79*******************.********************************8 PP
2Myb_DNA-binding41.43.2e-13200250148
                            TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                            r  W+ e+++++v av+qlG +   +k+I + m+  g++++++ s++qky+
  Cse_sc007911.1_g010.1 200 RVVWSVELHQQFVSAVNQLGIDkaVPKKILELMNvPGLSRENVASHLQKYR 250
                            678***********************************************7 PP
3Response_reg76.78.4e-26191271109
                            EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHH CS
           Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeeda 86 
                            vl+vdD+p+ +++l+++l+k +y e++++  +e  l ll+e++  +D++l D+ mp+mdG++ll++i  e  +lp+i+++a + +e +
  Cse_sc007911.1_g010.1  19 VLVVDDDPIWLMILEKMLKKCNY-EATVCNRAETGLSLLRENKsgYDIVLSDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDGSEIV 104
                            89*********************.***************999999**********************6654.8*************** PP

                            HHHHHTTESEEEESS--HHHHHH CS
           Response_reg  87 lealkaGakdflsKpfdpeelvk 109
                             + +  Ga d+l Kp+ +e l++
  Cse_sc007911.1_g010.1 105 MKGITHGACDYLIKPIRIEPLRN 127
                            ******************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    
MMPASSSVVP EKFPAGLRVL VVDDDPIWLM ILEKMLKKCN YEATVCNRAE TGLSLLRENK  60
SGYDIVLSDV HMPDMDGFKL LEHIGLEMDL PVIMMSADDG SEIVMKGITH GACDYLIKPI  120
RIEPLRNIFQ HVVRKRKYEW KDIERIANAE DVEKNQKVPD NGDYSSSANE GHNWKNVKKR  180
KDEDEDESEE REESSSKKPR VVWSVELHQQ FVSAVNQLGI DKAVPKKILE LMNVPGLSRE  240
NVASHLQKYR LYLRRLSGSP HMGSMNGSFM DSPEAGYRSV SSVNGFNLQT MAGAGQLPGQ  300
SFATLQAAML GRSNNVFSFE NLKMQYGQVN KSQPLHGIPT NMGPNQFVGL HQSRQNSFNG  360
VNNQVLVPMA SQGQSESQSQ PNINHHVLSH GLGMKLPSGG GNVPSYSMLN DSGLQDSYTS  420
HKNMGPSVPF SAGDGSVTHL NGARNNKMRY EEYNQDGLLA AILKPQQDGF GQVEREFGFD  480
GYPLDDLPGV T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175181KNVKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.11e-135ARR-B family protein