PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007915.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 225aa    MW: 25460.6 Da    PI: 9.0613
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007915.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.59.9e-32146204159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            ldDgy+WrKYGqK+vk+s++prsYYrCt+++C+vkk+++r ++d+++v++tYeg Hnh+
  Cse_sc007915.1_g080.1 146 LDDGYKWRKYGQKSVKNSHHPRSYYRCTHHTCNVKKQIQRLSKDNSIVVTTYEGIHNHP 204
                            59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MEGDDQHASQ QVPMNDNNVN VNMNSNNVNM NNINPYILDY LNTPMINNPL FQYPSSSSSP  60
VLPQLPLTMS NQLDNNNISL ESSNVDWVSL LSGFVNVDQG SMVGRGLSEG DDKIAARSSK  120
SMKSGRGKKV TPSRVAFHTR STEDILDDGY KWRKYGQKSV KNSHHPRSYY RCTHHTCNVK  180
KQIQRLSKDN SIVVTTYEGI HNHPCEKLME TLTPLLKQLQ FLSRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64000.15e-57WRKY family protein