PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007939.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 134aa    MW: 14912.8 Da    PI: 10.3231
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007939.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH30.18.2e-105878526
                           --SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                            C++f + G Ck+GdrCkF+H+
  Cse_sc007939.1_g030.1 58 MCSHFNK-GRCKFGDRCKFIHD 78
                           5******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MTRNILILEE STLNENATTN TTFDDNSSSS TVLVASHSSN PKGNHKSYLN TSYSLPQMCS  60
HFNKGRCKFG DRCKFIHDYR NRPGLSAKHI TGATNNMGTT LLTMGDTPRG NKIKITNGTP  120
GSKITLLRRE RYKD