PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007978.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 468aa MW: 50801.5 Da PI: 6.8754

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007978.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.0008	272	291	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+ s++++++L+rH Cse_sc007978.1_g030.1 272 FQCEVCKISCNSNEHLNRHF 291 89*****************5 PP
2	zf-C2H2	13.6	0.0002	334	353	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C Cg ++++++Lk+Hi+ Cse_sc007978.1_g030.1 334 SCDLCGIACNSNDMLKKHIS 353 7*****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MLEEEQQNPN PPPPGTDSPT NQHAGGTMSE ATSTVMHSAS NSDVVASHVV NDVIATTTTT 60 TQPKNIPVLQ CEICNVTCNT QDVLEIHKLG EKHLKTLQKL AESSANAPNT PVPPAEALTM 120 SPVDAVPSAI TEPKLSPPKP VVAVASETLL GEVDNKNQEL LESGDICNMM CSNQDEYMEH 180 VAVPSAITEP KMSPTKSVVA VASETLGELD DKNQELLQSG DICNMRCSNQ DEFMEHVASK 240 KRSEKACRYK WAQKRHIRVR FQKQYSNETA TFQCEVCKIS CNSNEHLNRH FSGKKHLKKL 300 KQSEEIPDPS VVSLDQPEST EGKTVELHQG KPLSCDLCGI ACNSNDMLKK HISGKKHQKN 360 LEKSLKPIGP SPAPAMEPVA TAPTMIGPFQ DEGKMVEGDG SNSKAKRARH HEDVGQKKQK 420 LLQGGASNAL SRCTLCNVVC TSSDGLITHF AGKKHLKLAL KQAEAQST

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MLEEEQQNPN PPPPGTDSPT NQHAGGTMSE ATSTVMHSAS NSDVVASHVV NDVIATTTTT  60
TQPKNIPVLQ CEICNVTCNT QDVLEIHKLG EKHLKTLQKL AESSANAPNT PVPPAEALTM  120
SPVDAVPSAI TEPKLSPPKP VVAVASETLL GEVDNKNQEL LESGDICNMM CSNQDEYMEH  180
VAVPSAITEP KMSPTKSVVA VASETLGELD DKNQELLQSG DICNMRCSNQ DEFMEHVASK  240
KRSEKACRYK WAQKRHIRVR FQKQYSNETA TFQCEVCKIS CNSNEHLNRH FSGKKHLKKL  300
KQSEEIPDPS VVSLDQPEST EGKTVELHQG KPLSCDLCGI ACNSNDMLKK HISGKKHQKN  360
LEKSLKPIGP SPAPAMEPVA TAPTMIGPFQ DEGKMVEGDG SNSKAKRARH HEDVGQKKQK  420
LLQGGASNAL SRCTLCNVVC TSSDGLITHF AGKKHLKLAL KQAEAQST