PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008042.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 279aa    MW: 31339.4 Da    PI: 8.0465
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008042.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.25.8e-31561951128
                    NAM   1 lppGfrFhPtdeelvveyLkkk.vegkk....lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknrat 78 
                            lp+G++F+P d+e++++ L+k+ v+g +    +   +     v+k+ +i++++P++Lp  v+ + +  +fF+++ k+y+tg+rk+r++
  Cse_sc008042.1_g010.1  56 LPRGVKFDPLDHEIIWHLLAKSgVSGFQphpfI---DefiptVVKDDGICYTHPQKLP-GVQMDGSVSHFFHRAIKAYNTGTRKRRKI 139
                            799************999988755555565552...233343688889**********.566678899******************86 PP

                    NAM  79 k.....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                            +     + +W++tg++k+v+  +g + g kk++v+y    +  k+ekt+Wvmh+y+l
  Cse_sc008042.1_g010.1 140 HgddfgEFRWHKTGRTKPVVL-DGVQRGNKKIMVLYisPVKGGKAEKTNWVMHQYHL 195
                            655544667************.99************6545777888*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MSGPSWVVDG SRFASKIRSA SCDPEHTNWK SNPTKACPNC HHIVDNSDVN QAWPGLPRGV  60
KFDPLDHEII WHLLAKSGVS GFQPHPFIDE FIPTVVKDDG ICYTHPQKLP GVQMDGSVSH  120
FFHRAIKAYN TGTRKRRKIH GDDFGEFRWH KTGRTKPVVL DGVQRGNKKI MVLYISPVKG  180
GKAEKTNWVM HQYHLGTAED EKDGEYVISK VFYQQQTNTK ANGKDEDIVL EDVNDPIVKV  240
DPVTPKSATP EPPRAERRVP AMGLEQELAV TYTDPPQVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-123NAC family protein