PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008044.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 384aa MW: 43034.8 Da PI: 4.9177

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008044.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	110.5	8.2e-35	177	231	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ Cse_sc008044.1_g070.1 177 KPRMRWTPELHESFVEAVNQLGGSERATPKGVLKLMNVEGLTIYHVKSHLQKYRT 231 79****************************************************8 PP
2	Myb_DNA-binding	57.5	3.2e-18	179	230	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m+ +g+t +++ks++qky+ Cse_sc008044.1_g070.1 179 RMRWTPELHESFVEAVNQLGGSeraTPKGVLKLMNvEGLTIYHVKSHLQKYR 230 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MNGQKWTYNP VCLQPSFDKQ LNHMGASGAM SSQNIPLVSR SSSDTVPFQV SQTSNFVNAQ 60 PVTLIGQSNA MTWGTESLDD LLEFPESVMS GNSQNERQNA LNSAGDHGRG NDPSWQNWDQ 120 LMSVDDNIES NWSEILADVD VPSLEPKQIQ PVISRPPVST IEACPVGSPT PNGSSIKPRM 180 RWTPELHESF VEAVNQLGGS ERATPKGVLK LMNVEGLTIY HVKSHLQKYR TARYKPELDE 240 GTSEKKSTSI DEIVSMDIKN KSLGFTDALK LQMEVQKQLH EQLEIQRNLQ LRIEEQGKYL 300 QMMFEQQRKM ENERLKPSSS NPDEEPSRSN ATEKPNDDKD SQKSKSKSTS QTEEQDVNNS 360 NINKECSPRI SKRARPDDDV ASMP

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MNGQKWTYNP VCLQPSFDKQ LNHMGASGAM SSQNIPLVSR SSSDTVPFQV SQTSNFVNAQ  60
PVTLIGQSNA MTWGTESLDD LLEFPESVMS GNSQNERQNA LNSAGDHGRG NDPSWQNWDQ  120
LMSVDDNIES NWSEILADVD VPSLEPKQIQ PVISRPPVST IEACPVGSPT PNGSSIKPRM  180
RWTPELHESF VEAVNQLGGS ERATPKGVLK LMNVEGLTIY HVKSHLQKYR TARYKPELDE  240
GTSEKKSTSI DEIVSMDIKN KSLGFTDALK LQMEVQKQLH EQLEIQRNLQ LRIEEQGKYL  300
QMMFEQQRKM ENERLKPSSS NPDEEPSRSN ATEKPNDDKD SQKSKSKSTS QTEEQDVNNS  360
NINKECSPRI SKRARPDDDV ASMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.1	4e-75	G2-like family protein