PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008064.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 312aa MW: 36555.1 Da PI: 8.427

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008064.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.2	3.7e-08	12	45	1	34
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkg 34 +g+WT+ Ed +lv +v+++G ++W+ Ia+ g g Cse_sc008064.1_g010.1 12 KGPWTEHEDIQLVFYVNMFGDRRWDFIAKVSGGG 45 79***************************99955 PP
2	Myb_DNA-binding	54	3.8e-17	123	168	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr+T+ E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ Cse_sc008064.1_g010.1 123 RGRMTPHEERLVLEYHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 168 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MNHIEDDETL RKGPWTEHED IQLVFYVNMF GDRRWDFIAK VSGGGRYKIS NLGLARVTIF 60 VQEKPKKRNF LFLQKKKLTL FHFLLPLINL FGELFFGENF TFIRTGKSCR LRWVNYLNPG 120 LKRGRMTPHE ERLVLEYHSK WGNRWSRIAR KLPGRTDNEI KNYWRTHMRK KAQENKRASS 180 PSSSYSNSSS SSSTCTNDPT INSVPITDTK EESFYDTGGI EMVPVARGKS NNTAMKHNKV 240 TYEEQEGIYS MDEIWRDIDL LENDGIQPFF DSCNDVTPQI WDYSLNSFWM TDDGQQEFST 300 NTFFPATSEH LY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	1e-61	MYB family protein