PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008120.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 622aa MW: 71537.5 Da PI: 4.6744

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008120.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164	5.4e-51	18	146	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWka 85 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi+evd++k+ePwd+++k++ +++wyfFs++dkky+tg+r+nrat++g+Wka Cse_sc008120.1_g040.1 18 VPPGFRFHPTEEELLNYYLRKKVAYEKIDL-DVIREVDLNKLEPWDIQEKCNIgstPQNDWYFFSHKDKKYPTGSRTNRATAAGFWKA 104 69**************************.9***********964444222455************************* PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 tg+dk ++s + + +g++ktLvfy+grap+g+k+dW+mheyrl Cse_sc008120.1_g040.1 105 TGRDKVIHS-SLRRIGMRKTLVFYQGRAPHGQKSDWIMHEYRL 146 ***99.8999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MSKEKVSISM NVNGQSKVPP GFRFHPTEEE LLNYYLRKKV AYEKIDLDVI REVDLNKLEP 60 WDIQEKCNIG STPQNDWYFF SHKDKKYPTG SRTNRATAAG FWKATGRDKV IHSSLRRIGM 120 RKTLVFYQGR APHGQKSDWI MHEYRLDDNI ITTQDSTVAS LCDYSHEEGW VICRVFKKKN 180 YHKSLENPQI PVSSIDTKAQ LQSLDKDCVI EQLLMYMDSR SCKQEYDNFT TNHDGMQQLV 240 NPINDLMTHL PRLDNSTMTT SPPVSSATFD DQGSCLKAYN SMSDLLTEIE HPRNNGFNMV 300 DEYECNKWAD LDNFVASQLN AYEESDEKLC FSISHDEQDV SRQHEATNEV DLWSMARSSL 360 SSSMDPLCHL SVASLCDYSH EEGWVICRVF KKKNYHKSLE NPQIPVSSID TKAQLQSFDK 420 DCVIEQLLMY MDSRSCKQES DNFTTNMHDG MQQLVNPTND LMTHLPRLDN STMTTSPPVS 480 SATFDDQHSC LRAYNSVSDL LTDVEHPRNN GFNMVDEFEC NKWDDLDKLV ASQLNAYEES 540 DEKNNGFNMV DEYECNKWAD LDNFVASQLN AYEESDEKLC FSISHDEQDV SRQHEATNEV 600 DLWSMARSSL SSSMDPLCHL SV

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MSKEKVSISM NVNGQSKVPP GFRFHPTEEE LLNYYLRKKV AYEKIDLDVI REVDLNKLEP  60
WDIQEKCNIG STPQNDWYFF SHKDKKYPTG SRTNRATAAG FWKATGRDKV IHSSLRRIGM  120
RKTLVFYQGR APHGQKSDWI MHEYRLDDNI ITTQDSTVAS LCDYSHEEGW VICRVFKKKN  180
YHKSLENPQI PVSSIDTKAQ LQSLDKDCVI EQLLMYMDSR SCKQEYDNFT TNHDGMQQLV  240
NPINDLMTHL PRLDNSTMTT SPPVSSATFD DQGSCLKAYN SMSDLLTEIE HPRNNGFNMV  300
DEYECNKWAD LDNFVASQLN AYEESDEKLC FSISHDEQDV SRQHEATNEV DLWSMARSSL  360
SSSMDPLCHL SVASLCDYSH EEGWVICRVF KKKNYHKSLE NPQIPVSSID TKAQLQSFDK  420
DCVIEQLLMY MDSRSCKQES DNFTTNMHDG MQQLVNPTND LMTHLPRLDN STMTTSPPVS  480
SATFDDQHSC LRAYNSVSDL LTDVEHPRNN GFNMVDEFEC NKWDDLDKLV ASQLNAYEES  540
DEKNNGFNMV DEYECNKWAD LDNFVASQLN AYEESDEKLC FSISHDEQDV SRQHEATNEV  600
DLWSMARSSL SSSMDPLCHL SV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-110	NAC family protein