PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008126.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 858aa MW: 96104.6 Da PI: 7.7358

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008126.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	31.3	4.1e-10	560	646	4	45
RWP-RK 4 eisledlskyFslpikdAAkeLg.............................................vclTvLKriCRqyGIkRWP 45 +++ e ++++F +pi +A+k Lg v+ ++LKr CR+++I+ WP Cse_sc008126.1_g020.1 560 SVTREAIQQNFGKPIGEASKALGgyvdnplgvptasvpqpswwkvnhvncrhgaqspdmnpvpmpsweVSRSTLKRVCRKLNIPSWP 646 6899**********************************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 858 aa Download sequence
SIKTGSKLKV LANDCINESD GTSSSREEVD GFFLSLSRPT GRDSLVPSSA ESSTSWTSKG 60 SRAWVEPKPA SQRPSKQHDP LKPPSTPPNT IITNPITNPA LRFGSDGVIG LKNKANNIAG 120 CHNEVSSKIQ QAFELITLRI DCCLIQFWSS CSVGKNELLK TADQPFSLGI YDRGLCDYRK 180 ESESKSFHVD DKYEEVQDLV PVVRVYKHRM PEWTSDVTNC YSKNQPLQVC AIRLNLHGYL 240 LLPVFDSSTK SCVGVLEFIT SSIYLDCAYE VQQIHRALEA ANLTSPQAFD TPTSYVDYTQ 300 HELDEIFNIL KDVCNAHKLP LAQTWTVSPR TSFVATERTI ARTCNSFNSS CIEKVCMSTT 360 ALPFLVDDLN LWPFREVCKE HHLLKSYGVV GRALSSQGSC FCADVTKLDE AEYSLVHNAS 420 MSGLTSCLAI YLHSIEHDDS YVLEFFLPVD MNEGADLHNL VQKVKMHLKF SSFEFGDLLC 480 TEVIGMQTEV SQRSSEMQLD SKDSPPVGET NVNVDSINAQ YQSAFSNDDQ KNLMKVYVND 540 VRSYTCDVVT KQRRKRIMDS VTREAIQQNF GKPIGEASKA LGGYVDNPLG VPTASVPQPS 600 WWKVNHVNCR HGAQSPDMNP VPMPSWEVSR STLKRVCRKL NIPSWPLPHR RKKCARLSIC 660 FIVWLLVRVK RWSCSSRRHG FSAKWWICGK HNAFDSQSKL SIEAYGSSMI SKPLAVPPKG 720 EKILEPLYLS QTPKESDDLI QTVNPKAPQA SFDMFPASPK KNVARVSVNI RMLTVKATFE 780 NDMIKFHFPL SSGLLELKNQ VALRFKLKDS RIHLKYRDED DDLILIACDT DLSNLLMPFS 840 ATTVGNNTIK LIVQMADA

Sequence ? help Back to Top

Protein Sequence Length: 858 aa Download sequence

SIKTGSKLKV LANDCINESD GTSSSREEVD GFFLSLSRPT GRDSLVPSSA ESSTSWTSKG  60
SRAWVEPKPA SQRPSKQHDP LKPPSTPPNT IITNPITNPA LRFGSDGVIG LKNKANNIAG  120
CHNEVSSKIQ QAFELITLRI DCCLIQFWSS CSVGKNELLK TADQPFSLGI YDRGLCDYRK  180
ESESKSFHVD DKYEEVQDLV PVVRVYKHRM PEWTSDVTNC YSKNQPLQVC AIRLNLHGYL  240
LLPVFDSSTK SCVGVLEFIT SSIYLDCAYE VQQIHRALEA ANLTSPQAFD TPTSYVDYTQ  300
HELDEIFNIL KDVCNAHKLP LAQTWTVSPR TSFVATERTI ARTCNSFNSS CIEKVCMSTT  360
ALPFLVDDLN LWPFREVCKE HHLLKSYGVV GRALSSQGSC FCADVTKLDE AEYSLVHNAS  420
MSGLTSCLAI YLHSIEHDDS YVLEFFLPVD MNEGADLHNL VQKVKMHLKF SSFEFGDLLC  480
TEVIGMQTEV SQRSSEMQLD SKDSPPVGET NVNVDSINAQ YQSAFSNDDQ KNLMKVYVND  540
VRSYTCDVVT KQRRKRIMDS VTREAIQQNF GKPIGEASKA LGGYVDNPLG VPTASVPQPS  600
WWKVNHVNCR HGAQSPDMNP VPMPSWEVSR STLKRVCRKL NIPSWPLPHR RKKCARLSIC  660
FIVWLLVRVK RWSCSSRRHG FSAKWWICGK HNAFDSQSKL SIEAYGSSMI SKPLAVPPKG  720
EKILEPLYLS QTPKESDDLI QTVNPKAPQA SFDMFPASPK KNVARVSVNI RMLTVKATFE  780
NDMIKFHFPL SSGLLELKNQ VALRFKLKDS RIHLKYRDED DDLILIACDT DLSNLLMPFS  840
ATTVGNNTIK LIVQMADA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-68	Nin-like family protein