PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008173.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NF-YB

Protein Properties

Length: 179aa MW: 19938.4 Da PI: 6.5322

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008173.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	159	7.1e-50	25	116	2	93
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89 ++q+r+lPianv+rimkk lPanakisk+aketvqecvsefi f+t+ea+dkcqrekrkting+dllwa++tlGf++yv +lk yl+k Cse_sc008173.1_g020.1 25 KDQERLLPIANVGRIMKKSLPANAKISKEAKETVQECVSEFINFITGEAADKCQREKRKTINGEDLLWAMTTLGFQNYVGSLKSYLNK 112 79************************************************************************************** PP NF-YB 90 yrel 93 y + Cse_sc008173.1_g020.1 113 YART 116 *765 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
MTAKRTQVSP AGSPSSENIS DTSSKDQERL LPIANVGRIM KKSLPANAKI SKEAKETVQE 60 CVSEFINFIT GEAADKCQRE KRKTINGEDL LWAMTTLGFQ NYVGSLKSYL NKYARTSESL 120 SDNDVCETSN STPKRVVSSQ GFDDMYRERV VGYGDELVNM VKLHDGKTVV ATHAQEFEW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	7e-53	NF-YB family protein