PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008181.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 232aa    MW: 25972 Da    PI: 7.3358
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008181.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-1884134256
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                             y+GVr++   g+WvAeIr p++   r+r++lg+++++++Aa a+++a+  l+ge
  Cse_sc008181.1_g020.1  84 LYRGVRQRN-HGKWVAEIRLPCN---RTRVWLGTYDSPKMAAYAYDQAACLLRGE 134
                            59****999.8*********965...4***********************99996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
LFSSVSKVPK NTTSWINTTC TNSSTIDSVY SNYPPSPVFH PQSGSSVYLQ QRDQLFTLSE  60
GFDSEQKFTT SPDGMINSST KRKLYRGVRQ RNHGKWVAEI RLPCNRTRVW LGTYDSPKMA  120
AYAYDQAACL LRGENARLNF CEEAQIGLIG DANKLKAIKT AVGNKIRVAI KKENCKKREE  180
NNHVANMNGS YMDSPENGFS GEDPGFDVAA DDYFLTGVPS YDPDLIWEIL DN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.18e-30ERF family protein