PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008181.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 215aa    MW: 24495.5 Da    PI: 6.2765
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008181.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-1867116255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                             y+GVr++   g+WvAeIr p++   r+r++lg+++++e+Aa a+++a+   +g
  Cse_sc008181.1_g030.1  67 LYRGVRQRN-HGKWVAEIRLPCN---RTRVWLGTYDSPEMAAYAYDQAACLVRG 116
                            59****999.8*********965...4*********************987776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MYNKPIWVYS NYPPSPVFHP QSGSSVYLEE RDQLFKLSEA LDSENKCTTS PYGVIDKSIN  60
SYRKRKLYRG VRQRNHGKWV AEIRLPCNRT RVWLGTYDSP EMAAYAYDQA ACLVRGENAR  120
LNFCDEAQIG LIGDANKLNA IKTTVDNKIR VAIRKENCKK REVNNHVANK SGSYMDSPED  180
GFSGEDMGFD VAADDYFLTG VPSYDPDLIW EILDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.11e-32ERF family protein