PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008209.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARF
Protein Properties Length: 679aa    MW: 75279.1 Da    PI: 7.5765
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008209.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.46.4e-24122223199
                            EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 
                            f k+lt+sd+++ g +++p+ +ae++         ++ +  t++ +d +g+ W++++iyr++++r++lt+GW++Fv++++L +gD++v
  Cse_sc008209.1_g010.1 122 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIV 207
                            89****************************996555555..8********************************************** PP

                            EEE-SSSEE..EEEEE-S CS
                     B3  82 Fkldgrsefelvvkvfrk 99 
                            F   +++++e +v+++r+
  Cse_sc008209.1_g010.1 208 FV--RTENGEICVGIRRA 223
                            **..559999*****997 PP
2Auxin_resp109.14.7e-36290372283
             Auxin_resp   2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                             + a+++++Fev Y+Pra+t++F vk++ + ++l++k+++GmRfkmafetedss++++ +Gtv++v+ +dp++WpnS+Wr+L+
  Cse_sc008209.1_g010.1 290 TSLAANGQPFEVAYYPRACTPDFFVKASTLTASLNNKWCAGMRFKMAFETEDSSRISWfMGTVSSVEVADPFNWPNSPWRLLQ 372
                            67899****************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 679 aa     Download sequence    
MSEVDKGVNW QLWHACAGGM VQMPLLNTNV YYFPQGHAEH TLSNVDFSGM GRVGGVGRVP  60
ALVLCKVVGV RYLADFQSDE VYAKIRLVPL RYGDGEGEVD DGVTGGRGNG NGDGFLDKLS  120
SFAKTLTQSD ANNGGGFSVP RYCAETIFPR LDYSADPPVQ TVVAKDVHGE IWKFRHIYRG  180
TPRRHLLTTG WSSFVNQKKL VAGDSIVFVR TENGEICVGI RRAKKGGVGG PDSLSGWNSY  240
PKNTASFYGA FPSCLRENEN KLMRSGSNRN MNIDYGGRRK VRPEDVIKAT SLAANGQPFE  300
VAYYPRACTP DFFVKASTLT ASLNNKWCAG MRFKMAFETE DSSRISWFMG TVSSVEVADP  360
FNWPNSPWRL LQVNWDEPDL LQNVKRVSPW LVEVVSSMPH IHLTPFSPQR KKLRLPQPPD  420
LPQSNYALSS SFSGIPLGPT SPFGCLPENI VPGSIQGARQ ARFGIPLLDL NQSTHKLQLG  480
HFPSSLEHLD LYAKDPDGII RDENSDEVSC VLTMGSSSNK SEKSEDKVKA PLFILFGQPI  540
HIERQISSDH MDSKVANAND VLQTADHGLD TGHCKIFLDS EDIGRTIDLS VLESYEELER  600
KLANLFGIKT FNYSIHVLYK DSTGDVKQIG DEPFSVFVRK ARSLTIPLDA CNHNDKRKWS  660
TKLQTAENMD STLRTRQAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28350.10.0ARF family protein