PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008244.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TCP

Protein Properties

Length: 269aa MW: 30497.3 Da PI: 7.4678

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008244.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	81.8	1.8e-25	44	163	3	96
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......................... 65 g+kdrhsk+ T +g+RdRR+Rls+++a+ ++ Lqd+LG+ ++s i+WLl + k i++l+ + Cse_sc008244.1_g060.1 44 GGKDRHSKVWTVKGLRDRRIRLSVPTAIDLYHLQDQLGLTQPSMVIDWLLDATKDDIDKLPPLqmaledfnrfhlpstfvpqdfhstq 131 78*************************************************************8888888888777776666665544 PP TCP 66 .ssssaseceaesssssasnsssgkaaksaak 96 s+s+ ++++ +++ + +n+ +g++++++ + Cse_sc008244.1_g060.1 132 lSFSPYFNTTNYDHQRTRGNEAIGENKPKTIN 163 44444444444444444444444444333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MINNTYDQEG GMINSQKLSN PNQISRRHSG IKNPRIVRAS RDFGGKDRHS KVWTVKGLRD 60 RRIRLSVPTA IDLYHLQDQL GLTQPSMVID WLLDATKDDI DKLPPLQMAL EDFNRFHLPS 120 TFVPQDFHST QLSFSPYFNT TNYDHQRTRG NEAIGENKPK TINYHELHPS SNLSLSRPDH 180 QLDTYASLLP PAMAPPSEPQ VSCFSGITTP SFFSPYFMPN HFQLLSSNSP HGLTNSLVPI 240 PLNLMDTEMK LPFGLNMNTN VSSQSNHNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	6e-40	TCP family protein