PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008289.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 101aa    MW: 11511.3 Da    PI: 10.4668
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008289.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.76.3e-142566345
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                           rWT++Ed  l++ +  +G + Wk+I+++++  R++ +c+ rw+
  Cse_sc008289.1_g030.1 25 RWTPDEDAMLLKHIDTHGDRYWKLISEKIP-ARSADSCRKRWR 66
                           9*****************************.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MASSSTTSEA SVTSCVRQKS YPRIRWTPDE DAMLLKHIDT HGDRYWKLIS EKIPARSADS  60
CRKRWRYQLG PMMAKLHKKI EPRPPSPSPP KLIDFLGIGS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.12e-13MYB family protein