PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008345.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 249aa    MW: 28854.4 Da    PI: 10.0088
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008345.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR153.77e-17195290
                   FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklele 84
                           +Y++YA   GF+++k++++ + ++g + ++  +C+ke  +++ + +      +ek++r+++ + tgCka++++++e  +gk++++++  +
  Cse_sc008345.1_g060.1  1 MYSTYAVAGGFQIKKAAQRLT-KSGIVQHKYIMCNKEEAPRHINVDtldpkhSEKQKRNTTLHVTGCKARIRLELEIvSGKYKLIQFIAK 89
                           6***************99888.7888999999*****999988777899998999999999***************99************ PP

                   FAR1 85 HnHela 90
                           HnH l 
  Cse_sc008345.1_g060.1 90 HNHMLI 95
                           ***997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MYSTYAVAGG FQIKKAAQRL TKSGIVQHKY IMCNKEEAPR HINVDTLDPK HSEKQKRNTT  60
LHVTGCKARI RLELEIVSGK YKLIQFIAKH NHMLIPKEYK HFTKKKIKMT QEEKMFLVKA  120
ATNKIGATRA HNLLTSMKGG YEYVHGTSDD FKNHQRDINM FIGESDAQML INKMENRKMY  180
VPNFTFQYKV EDSELVAMFW ADEVAKCNYK EFGDIVSFDA TFRSNKYNMV FVPFTGVDKI  240
LHVLQGSHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-27FAR1 family protein