PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008420.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 227aa    MW: 26438.6 Da    PI: 10.2015
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008420.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.26.1e-112475147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                           ++rWT +E+  l+ +v+++G+g W+ I +        k R+  ++k++w+++
  Cse_sc008420.1_g030.1 24 KKRWTLDEESALIAGVRKYGMGKWRDILSDQLiseclKDRSNVDLKDKWRNL 75
                           68********************9999987777778888************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MFHFFLHTNT QKPYYLSAQM GKQKKRWTLD EESALIAGVR KYGMGKWRDI LSDQLISECL  60
KDRSNVDLKD KWRNLCANVG YLTLVAEPYH HLQMEDKWQN LGDNVAVLPQ DTKPVPKVVA  120
TTRPKIRLWR IIMIITVIII IGCVMKSHWK LLYLLPPIKM LWVEICDMTP AKLIKKWKDL  180
RRSTRTACLG SADGMAFCWI EVLFCKVIYG RMIFVGKFRK LGASYSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.15e-20MYB_related family protein