PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008467.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 256aa MW: 29392.1 Da PI: 7.6852

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008467.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.7	2.2e-14	98	199	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...............tekerrtraetrtgCkaklkvkkek. 72 ++Y+ YA + F vrks skk ng++t++ Cs+ gk+++ ++ ++k++r++++t t+Cka++ k + Cse_sc008467.1_g020.1 98 NMYKVYAAKGRFGVRKSGSKKW--NGQVTHKYVICSRGGKPRKMAETntlnedvqengnvdgKTKRKRRSSTTLTDCKARICFKVIEg 183 58*************99988..999***********999999********99888899999999********99 PP FAR1 73 dgkwevtkleleHnHe 88 ++ + +++ ++HnH+ Cse_sc008467.1_g020.1 184 TNMYSLYDWTENHNHP 199 *************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MVDIVDIVQD SNTNPIREDD ILLHELNDQP IFLPEQDLIM ENAHHDQDDS NEANVDVYDL 60 DPEFIPTPNG SSYWVPNIPL DENPKKGALF HTYEEAINMY KVYAAKGRFG VRKSGSKKWN 120 GQVTHKYVIC SRGGKPRKMA ETNTLNEDVQ ENGNVDGKTK RKRRSSTTLT DCKARICFKV 180 IEGTNMYSLY DWTENHNHPP IVQSNMNLSR ARRKLRYGDY MFIHRASLTS IRVQKAHRLR 240 VALLGGFDQV RGMPVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	210	216	RARRKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	7e-07	FAR1 family protein