PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008581.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 173aa MW: 20743.5 Da PI: 9.8853

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008581.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.8	1.5e-17	60	156	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...........tekerrtraetrtgCkaklkvkkekdgkwevt 79 Y+eY ++ F+vrks+++k+ ei +++ vCs+eg+ e+k++ ++k++ +r+++r+gC+ak +++++d+++e++ Cse_sc008581.1_g050.1 60 YKEYDRKGRFEVRKSTQEKN--RYEISHKWIVCSREGFFPEKKQQgkkqqgenednSKKQKPNRPSSRCGCEAKTCLRLTRDKNYELY 145 9************99998..7789*******99998888899999877777889********************** PP FAR1 80 kleleHnHela 90 ++e++HnH+l+ Cse_sc008581.1_g050.1 146 SFEEKHNHNLV 156 *******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MDAYTTPEKP NERLPMLRSF GIEKVSPKGT TIHWIPDVDE SIKPILFTRF KSIDAAFESY 60 KEYDRKGRFE VRKSTQEKNR YEISHKWIVC SREGFFPEKK QQGKKQQGEN EDNSKKQKPN 120 RPSSRCGCEA KTCLRLTRDK NYELYSFEEK HNHNLVHPYD RHYLKSLRKL NYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	3e-08	FAR1 family protein