PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008592.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 138aa    MW: 16192.8 Da    PI: 10.47
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008592.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK74.11.7e-23650852
                 RWP-RK  8 edlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                           +++s+yF+++i++AAkeL+v+l++LK  CR  GIkRWP+Rk+ksl
  Cse_sc008592.1_g020.1  6 DTISQYFHMTIRQAAKELNVGLSILKYNCRDVGIKRWPYRKLKSL 50
                           689****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MAYNKDTISQ YFHMTIRQAA KELNVGLSIL KYNCRDVGIK RWPYRKLKSL KTLINDFQAE  60
NGGAQPENDK REIIKMLKEE KRQLEDNPNL QLARTTKMLR ACNSKSKYQK RKKHEFGIVV  120
IKSNSNKCYT VAVFISYQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66990.14e-26Nin-like family protein