PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008611.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

AP2

Protein Properties

Length: 198aa MW: 22625.8 Da PI: 9.7776

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008611.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.3	1.4e-11	58	107	1	53
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 s y+GV++++++grW A+I + k +lg+f t+ee a+a+ a k+ Cse_sc008611.1_g020.1 58 SIYRGVTRHHQQGRWQARIGRV-----AghKDLYLGTFATEEEVAEAYGIATIKF 107 57**************9885.....235***************96665555 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MGRIKSCRSI FEEWNQLLYF CFAVANYAQE LQDMKNATKQ EFIASLIRKS SGFSRGASIY 60 RGVTRHHQQG RWQARIGRVA GHKDLYLGTF ATEEEVAEAY GIATIKFRGI NAMTNFEMNR 120 GSGVPEMSTA MALLPPPARG HGYLSRREER FHEFSRIERV TERVSCGDVF TIATRDATLL 180 VCGPYCYIPD RKKRPENR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	9e-51	AP2 family protein